Publications

Found 154 results
Filters: Author is Peter Tompa  [Clear All Filters]
2016
Guharoy, M., Bhowmick P., and Tompa P., "Design Principles Involving Protein Disorder Facilitate Specific Substrate Selection and Degradation by the Ubiquitin-Proteasome System.", J Biol Chem, vol. 291, issue 13, pp. 6723-31, 2016 Mar 25.
Lazar, T., Schad E., Szabo B., Horvath T., Meszaros A., Tompa P., and Tantos Á., "Intrinsic protein disorder in histone lysine methylation.", Biol Direct, vol. 11, pp. 30, 2016 Jun 30.
Piai, A., Calçada E. O., Tarenzi T., Del Grande A., Varadi M., Tompa P., Felli I. C., and Pierattelli R., "Just a Flexible Linker? The Structural and Dynamic Properties of CBP-ID4 Revealed by NMR Spectroscopy.", Biophys J, vol. 110, issue 2, pp. 372-81, 2016 Jan 19.
Braten, O., Livneh I., Ziv T., Admon A., Kehat I., Caspi L. H., Gonen H., Bercovich B., Godzik A., Jahandideh S., et al., "Numerous proteins with unique characteristics are degraded by the 26S proteasome following monoubiquitination.", Proc Natl Acad Sci U S A, vol. 113, issue 32, pp. E4639-47, 2016 Aug 09.
Tompa, P., "The principle of conformational signaling.", Chem Soc Rev, vol. 45, issue 15, pp. 4252-84, 2016 Jul 25.
Pancsa, R., Varadi M., Tompa P., and Vranken W. F., "Start2Fold: a database of hydrogen/deuterium exchange data on protein folding and stability.", Nucleic Acids Res, vol. 44, issue D1, pp. D429-34, 2016 Jan 04.
Smithers, B., Oates M. E., Tompa P., and Gough J., "Three reasons protein disorder analysis makes more sense in the light of collagen.", Protein Sci, vol. 25, issue 5, pp. 1030-6, 2016 May.
Guharoy, M., Bhowmick P., Sallam M., and Tompa P., "Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system.", Nat Commun, vol. 7, pp. 10239, 2016 Jan 06.
Tompa, P., Han K-H., Bokor M., Kamasa P., Tantos Á., Fritz B., Kim D-H., Lee C., Verebélyi T., and Tompa K., "Wide-line NMR and DSC studies on intrinsically disordered p53 transactivation domain and its helically pre-structured segment.", BMB Rep, vol. 49, issue 9, pp. 497-501, 2016 Sep.
2015
Bhowmick, P., Guharoy M., and Tompa P., "Bioinformatics Approaches for Predicting Disordered Protein Motifs.", Adv Exp Med Biol, vol. 870, pp. 291-318, 2015.
Varadi, M., Vranken W., Guharoy M., and Tompa P., "Computational approaches for inferring the functions of intrinsically disordered proteins.", Front Mol Biosci, vol. 2, pp. 45, 2015.
Varadi, M., Guharoy M., Zsolyomi F., and Tompa P., "DisCons: a novel tool to quantify and classify evolutionary conservation of intrinsic protein disorder.", BMC Bioinformatics, vol. 16, pp. 153, 2015 May 13.
Tusnády, G. E., Dobson L., and Tompa P., "Disordered regions in transmembrane proteins.", Biochim Biophys Acta, vol. 1848, issue 11 Pt A, pp. 2839-48, 2015 Nov.
Borysik, A. J., Kovacs D., Guharoy M., and Tompa P., "Ensemble Methods Enable a New Definition for the Solution to Gas-Phase Transfer of Intrinsically Disordered Proteins.", J Am Chem Soc, vol. 137, issue 43, pp. 13807-17, 2015 Nov 04.
Varadi, M., Zsolyomi F., Guharoy M., and Tompa P., "Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins.", PLoS One, vol. 10, issue 10, pp. e0139731, 2015.
Tompa, P., Schad E., Tantos Á., and Kalmar L., "Intrinsically disordered proteins: emerging interaction specialists.", Curr Opin Struct Biol, vol. 35, pp. 49-59, 2015 Dec.
Varadi, M., and Tompa P., "The Protein Ensemble Database.", Adv Exp Med Biol, vol. 870, pp. 335-49, 2015.
Aouacheria, A., Combet C., Tompa P., and J Hardwick M., "Redefining the BH3 Death Domain as a 'Short Linear Motif'.", Trends Biochem Sci, vol. 40, issue 12, pp. 736-48, 2015 Dec.
Tantos, Á., Kalmar L., and Tompa P., "The role of structural disorder in cell cycle regulation, related clinical proteomics, disease development and drug targeting.", Expert Rev Proteomics, vol. 12, issue 3, pp. 221-33, 2015 Jun.
Guharoy, M., Pauwels K., and Tompa P., "SnapShot: Intrinsic Structural Disorder.", Cell, vol. 161, issue 5, pp. 1230-1230.e1, 2015 May 21.
Cedeño, C., Raveh-Hamit H., Dinnyés A., and Tompa P., "Towards Understanding Protein Disorder In-Cell.", Adv Exp Med Biol, vol. 870, pp. 319-34, 2015.
2014
van der Lee, R., Buljan M., Lang B., Weatheritt R. J., Daughdrill G. W., A Dunker K., Fuxreiter M., Gough J., Gsponer J., Jones D. T., et al., "Classification of intrinsically disordered regions and proteins.", Chem Rev, vol. 114, issue 13, pp. 6589-631, 2014 Jul 09.
Lee, C., Kalmar L., Xue B., Tompa P., Daughdrill G. W., Uversky V. N., and Han K-H., "Contribution of proline to the pre-structuring tendency of transient helical secondary structure elements in intrinsically disordered proteins.", Biochim Biophys Acta, vol. 1840, issue 3, pp. 993-1003, 2014 Mar.
Szöllősi, D., Horvath T., Han K-H., Dokholyan N. V., Tompa P., Kalmar L., and Hegedűs T., "Discrete molecular dynamics can predict helical prestructured motifs in disordered proteins.", PLoS One, vol. 9, issue 4, pp. e95795, 2014.
Cilia, E., Pancsa R., Tompa P., Lenaerts T., and Vranken W. F., "The DynaMine webserver: predicting protein dynamics from sequence.", Nucleic Acids Res, vol. 42, issue Web Server issue, pp. W264-70, 2014 Jul.

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