Publications
Found 49 results
Filters: Keyword is Hydrogen Bonding [Clear All Filters]
"Sulfur Denitrosylation by an Engineered Trx-like DsbG Enzyme Identifies Nucleophilic Cysteine Hydrogen Bonds as Key Functional Determinant.",
J Biol Chem, vol. 291, issue 29, pp. 15020-8, 2016 07 15.
"The concerted action of a positive charge and hydrogen bonds dynamically regulates the pKa of the nucleophilic cysteine in the NrdH-redoxin family.",
Protein Sci, vol. 23, issue 2, pp. 238-42, 2014 Feb.
"Multimeric and differential binding of CIN85/CD2AP with two atypical proline-rich sequences from CD2 and Cbl-b*.",
FEBS J, vol. 280, issue 14, pp. 3399-415, 2013 Jul.
"Nontrivial behavior of water in the vicinity and inside lipid bilayers as probed by molecular dynamics simulations.",
ACS Nano, vol. 7, issue 10, pp. 9428-42, 2013 Oct 22.
"Understanding the pK(a) of redox cysteines: the key role of hydrogen bonding.",
Antioxid Redox Signal, vol. 18, issue 1, pp. 94-127, 2013 Jan 01.
"Characterization and prediction of the binding site in DNA-binding proteins: improvement of accuracy by combining residue composition, evolutionary conservation and structural parameters.",
Nucleic Acids Res, vol. 40, issue 15, pp. 7150-61, 2012 Aug.
"Empirical estimation of the energetic contribution of individual interface residues in structures of protein-protein complexes.",
J Comput Aided Mol Des, vol. 23, issue 9, pp. 645-54, 2009 Sep.
"N-Arylmethyl substituted iminoribitol derivatives as inhibitors of a purine specific nucleoside hydrolase.",
Bioorg Med Chem, vol. 16, issue 14, pp. 6752-63, 2008 Jul 15.
"Role of the amino acid sequence in domain swapping of the B1 domain of protein G.",
Proteins, vol. 72, issue 1, pp. 88-104, 2008 Jul.
"Structural and kinetic contributions of the oxyanion binding site to the catalytic activity of acylaminoacyl peptidase.",
J Struct Biol, vol. 162, issue 2, pp. 312-23, 2008 May.
"The conserved active site proline determines the reducing power of Staphylococcus aureus thioredoxin.",
J Mol Biol, vol. 368, issue 3, pp. 800-11, 2007 May 4.
"Comparative NMR study on the impact of point mutations on protein stability of Pseudomonas mendocina lipase.",
Protein Sci, vol. 15, issue 8, pp. 1915-27, 2006 Aug.
"Development of the signal in sensory rhodopsin and its transfer to the cognate transducer.",
Nature, vol. 440, issue 7080, pp. 115-9, 2006 Mar 2.
"HPr as a model protein in structure, interaction, folding and stability studies.",
Protein Pept Lett, vol. 12, issue 2, pp. 123-37, 2005 Feb.
"Influence of the pi-pi interaction on the hydrogen bonding capacity of stacked DNA/RNA bases.",
Nucleic Acids Res, vol. 33, issue 6, pp. 1779-89, 2005.
"Substrate-assisted leaving group activation in enzyme-catalyzed N-glycosidic bond cleavage.",
J Biol Chem, vol. 280, issue 15, pp. 14799-802, 2005 Apr 15.
"Chemical basis for the affinity maturation of a camel single domain antibody.",
J Biol Chem, vol. 279, issue 51, pp. 53593-601, 2004 Dec 17.
"Crystal structure of T state aspartate carbamoyltransferase of the hyperthermophilic archaeon Sulfolobus acidocaldarius.",
J Mol Biol, vol. 339, issue 4, pp. 887-900, 2004 Jun 11.
"Shift in nucleotide conformational equilibrium contributes to increased rate of catalysis of GpAp versus GpA in barnase.",
Proteins, vol. 56, issue 2, pp. 261-76, 2004 Aug 1.
"Solving the phase problem for carbohydrate-binding proteins using selenium derivatives of their ligands: a case study involving the bacterial F17-G adhesin.",
Acta Crystallogr D Biol Crystallogr, vol. 59, issue Pt 6, pp. 1012-5, 2003 Jun.
"Structural basis of carbohydrate recognition by the lectin LecB from Pseudomonas aeruginosa.",
J Mol Biol, vol. 331, issue 4, pp. 861-70, 2003 Aug 22.
"Conserved water molecules in MHC class-I molecules and their putative structural and functional roles.",
Protein Eng, vol. 15, issue 8, pp. 697-705, 2002 Aug.
"A nucleophile activation dyad in ribonucleases. A combined X-ray crystallographic/ab initio quantum chemical study.",
J Biol Chem, vol. 277, issue 39, pp. 36770-4, 2002 Sep 27.
"Pescador: the PEptides in Solution ConformAtion Database: Online Resource.",
J Biomol NMR, vol. 23, issue 2, pp. 85-102, 2002 Jun.
"Solution structure of the main alpha-amylase inhibitor from amaranth seeds.",
Eur J Biochem, vol. 268, issue 8, pp. 2379-89, 2001 Apr.