Publications

Found 141 results
Filters: Keyword is Proteins  [Clear All Filters]
2019
Pancsa, R., D. Kovacs, and P. Tompa, "Misprediction of Structural Disorder in Halophiles.", Molecules, vol. 24, issue 3, 2019 Jan 29.
2018
Tompa, K., M. Bokor, and P. Tompa, "The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation.", Int J Mol Sci, vol. 19, issue 11, 2018 Nov 12.
2017
Boeynaems, S., E. Bogaert, D. Kovacs, A. Konijnenberg, E. Timmerman, A. Volkov, M. Guharoy, M. De Decker, T. Jaspers, V. H. Ryan, et al., "Phase Separation of C9orf72 Dipeptide Repeats Perturbs Stress Granule Dynamics.", Mol Cell, vol. 65, issue 6, pp. 1044-1055.e5, 2017 Mar 16.
Sormanni, P., D. Piovesan, G. T. Heller, M. Bonomi, P. Kukic, C. Camilloni, M. Fuxreiter, Z. Dosztányi, R. V. Pappu, M. M Babu, et al., "Simultaneous quantification of protein order and disorder.", Nat Chem Biol, vol. 13, issue 4, pp. 339-342, 2017 03 22.
2016
Hristozova, N., P. Tompa, and D. Kovacs, "A Novel Method for Assessing the Chaperone Activity of Proteins.", PLoS One, vol. 11, issue 8, pp. e0161970, 2016.
Guharoy, M., P. Bhowmick, M. Sallam, and P. Tompa, "Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system.", Nat Commun, vol. 7, pp. 10239, 2016 Jan 06.
2015
Marcon, E., H. Jain, A. Bhattacharya, H. Guo, S. Phanse, S. Pu, G. Byram, B. C. Collins, E. Dowdell, M. Fenner, et al., "Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation.", Nat Methods, vol. 12, issue 8, pp. 725-31, 2015 Aug.
Mackinnon, S. S., and S. J. Wodak, "Landscape of intertwined associations in multi-domain homo-oligomeric proteins.", J Mol Biol, vol. 427, issue 2, pp. 350-70, 2015 Jan 30.
Moroz, Y. S., T. T. Dunston, O. V. Makhlynets, O. V. Moroz, Y. Wu, J. H. Yoon, A. B. Olsen, J. M. McLaughlin, K. L. Mack, P. M. Gosavi, et al., "New Tricks for Old Proteins: Single Mutations in a Nonenzymatic Protein Give Rise to Various Enzymatic Activities.", J Am Chem Soc, vol. 137, issue 47, pp. 14905-11, 2015 Dec 02.
Varadi, M., and P. Tompa, "The Protein Ensemble Database.", Adv Exp Med Biol, vol. 870, pp. 335-49, 2015.
Guharoy, M., K. Pauwels, and P. Tompa, "SnapShot: Intrinsic Structural Disorder.", Cell, vol. 161, issue 5, pp. 1230-1230.e1, 2015 May 21.
2014
Koromyslova, A. D., A. O. Chugunov, and R. G. Efremov, "Deciphering fine molecular details of proteins' structure and function with a Protein Surface Topography (PST) method.", J Chem Inf Model, vol. 54, issue 4, pp. 1189-99, 2014 Apr 28.
Cilia, E., R. Pancsa, P. Tompa, T. Lenaerts, and W. F. Vranken, "The DynaMine webserver: predicting protein dynamics from sequence.", Nucleic Acids Res, vol. 42, issue Web Server issue, pp. W264-70, 2014 Jul.
Tompa, P., N. E. Davey, T. J. Gibson, and M. M Babu, "A million peptide motifs for the molecular biologist.", Mol Cell, vol. 55, issue 2, pp. 161-9, 2014 Jul 17.
Turinsky, A. L., S. Razick, B. Turner, I. M. Donaldson, and S. J. Wodak, "Navigating the global protein-protein interaction landscape using iRefWeb.", Methods Mol Biol, vol. 1091, pp. 315-31, 2014.
2013
Lensink, M. F., and S. J. Wodak, "Docking, scoring, and affinity prediction in CAPRI.", Proteins, vol. 81, issue 12, pp. 2082-95, 2013 Dec.
Drobnak, I., N. De Jonge, S. Haesaerts, G. Vesnaver, R. Loris, and J. Lah, "Energetic basis of uncoupling folding from binding for an intrinsically disordered protein.", J Am Chem Soc, vol. 135, issue 4, pp. 1288-94, 2013 Jan 30.
Schad, E., L. Kalmar, and P. Tompa, "Exon-phase symmetry and intrinsic structural disorder promote modular evolution in the human genome.", Nucleic Acids Res, vol. 41, issue 8, pp. 4409-22, 2013 Apr.
Cilia, E., R. Pancsa, P. Tompa, T. Lenaerts, and W. F. Vranken, "From protein sequence to dynamics and disorder with DynaMine.", Nat Commun, vol. 4, pp. 2741, 2013.
van der Schot, G., Z. Zhang, R. Vernon, Y. Shen, W. F. Vranken, D. Baker, A. M. J. J. Bonvin, and O. F. Lange, "Improving 3D structure prediction from chemical shift data.", J Biomol NMR, vol. 57, issue 1, pp. 27-35, 2013 Sep.
Kovacs, D., B. Szabo, R. Pancsa, and P. Tompa, "Intrinsically disordered proteins undergo and assist folding transitions in the proteome.", Arch Biochem Biophys, vol. 531, issue 1-2, pp. 80-9, 2013 Mar.
Guerry, P., L. Salmon, L. Mollica, J. L. Ortega Roldan, P. Markwick, N. A. J. van Nuland, A. J McCammon, and M. Blackledge, "Mapping the population of protein conformational energy sub-states from NMR dipolar couplings.", Angew Chem Int Ed Engl, vol. 52, issue 11, pp. 3181-5, 2013 Mar 11.
Wodak, S. J., J. Vlasblom, A. L. Turinsky, and S. Pu, "Protein-protein interaction networks: the puzzling riches.", Curr Opin Struct Biol, vol. 23, issue 6, pp. 941-53, 2013 Dec.
Montelione, G. T., M. Nilges, A. Bax, P. Güntert, T. Herrmann, J. S. Richardson, C. D. Schwieters, W. F. Vranken, G. W. Vuister, D. S. Wishart, et al., "Recommendations of the wwPDB NMR Validation Task Force.", Structure, vol. 21, issue 9, pp. 1563-70, 2013 Sep 3.
Messens, J., and J-F. Collet, "Thiol-disulfide exchange in signaling: disulfide bonds as a switch.", Antioxid Redox Signal, vol. 18, issue 13, pp. 1594-6, 2013 May 01.

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