Publications

Found 14 results
Filters: Keyword is DNA-Binding Proteins  [Clear All Filters]
2016
Zorzini, V., A. Mernik, J. Lah, Y. G. J. Sterckx, N. De Jonge, A. Garcia-Pino, H. De Greve, W. Versées, and R. Loris, "Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.", J Biol Chem, vol. 291, issue 21, pp. 10950-60, 2016 May 20.
2015
Zorzini, V., L. Buts, E. Schrank, Y. G. J. Sterckx, M. Respondek, H. Engelberg-Kulka, R. Loris, K. Zangger, and N. A. J. van Nuland, "Escherichia coli antitoxin MazE as transcription factor: insights into MazE-DNA binding.", Nucleic Acids Res, vol. 43, issue 2, pp. 1241-56, 2015 Jan.
Mackinnon, S. S., and S. J. Wodak, "Landscape of intertwined associations in multi-domain homo-oligomeric proteins.", J Mol Biol, vol. 427, issue 2, pp. 350-70, 2015 Jan 30.
2014
Zorzini, V., L. Buts, M. Sleutel, A. Garcia-Pino, A. Talavera, S. Haesaerts, H. De Greve, A. Cheung, N. A. J. van Nuland, and R. Loris, "Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.", Nucleic Acids Res, vol. 42, issue 10, pp. 6709-25, 2014 Jun.
2012
Dey, S., A. Pal, M. Guharoy, S. Sonavane, and P. Chakrabarti, "Characterization and prediction of the binding site in DNA-binding proteins: improvement of accuracy by combining residue composition, evolutionary conservation and structural parameters.", Nucleic Acids Res, vol. 40, issue 15, pp. 7150-61, 2012 Aug.
2011
Zorzini, V., S. Haesaerts, N. P. Donegan, Z. Fu, A. L. Cheung, N. A. J. van Nuland, and R. Loris, "Crystallization of the Staphylococcus aureus MazF mRNA interferase.", Acta Crystallogr Sect F Struct Biol Cryst Commun, vol. 67, issue Pt 3, pp. 386-9, 2011 Mar 1.
2010
Yuan, J., Y. Sterckx, L. A. Mitchenall, A. Maxwell, R. Loris, and M. K. Waldor, "Vibrio cholerae ParE2 poisons DNA gyrase via a mechanism distinct from other gyrase inhibitors.", J Biol Chem, vol. 285, issue 51, pp. 40397-408, 2010 Dec 17.
2009
Biswas, S., M. Guharoy, and P. Chakrabarti, "Dissection, residue conservation, and structural classification of protein-DNA interfaces.", Proteins, vol. 74, issue 3, pp. 643-54, 2009 Feb 15.
2006
Simonis, N., D. Gonze, C. Orsi, J. van Helden, and S. J. Wodak, "Modularity of the transcriptional response of protein complexes in yeast.", J Mol Biol, vol. 363, issue 2, pp. 589-610, 2006 Oct 20.
2005
Lah, J., M. Simic, G. Vesnaver, I. Marianovsky, G. Glaser, H. Engelberg-Kulka, and R. Loris, "Energetics of structural transitions of the addiction antitoxin MazE: is a programmed bacterial cell death dependent on the intrinsically flexible nature of the antitoxins?", J Biol Chem, vol. 280, issue 17, pp. 17397-407, 2005 Apr 29.
2003
Loris, R., I. Marianovsky, J. Lah, T. Laeremans, H. Engelberg-Kulka, G. Glaser, S. Muyldermans, and L. Wyns, "Crystal structure of the intrinsically flexible addiction antidote MazE.", J Biol Chem, vol. 278, issue 30, pp. 28252-7, 2003 Jul 25.
Lah, J., I. Marianovsky, G. Glaser, H. Engelberg-Kulka, J. Kinne, L. Wyns, and R. Loris, "Recognition of the intrinsically flexible addiction antidote MazE by a dromedary single domain antibody fragment. Structure, thermodynamics of binding, stability, and influence on interactions with DNA.", J Biol Chem, vol. 278, issue 16, pp. 14101-11, 2003 Apr 18.
2001
Nadassy, K., I. Tomás-Oliveira, I. Alberts, J. Janin, and S. J. Wodak, "Standard atomic volumes in double-stranded DNA and packing in protein--DNA interfaces.", Nucleic Acids Res, vol. 29, issue 16, pp. 3362-76, 2001 Aug 15.
2000
Dao-Thi, M. H., J. Messens, L. Wyns, and J. Backmann, "The thermodynamic stability of the proteins of the ccd plasmid addiction system.", J Mol Biol, vol. 299, issue 5, pp. 1373-86, 2000 Jun 23.