Publications

Found 33 results
Filters: Keyword is Models, Chemical  [Clear All Filters]
2009
Roos, G., Foloppe N., Van Laer K., Wyns L., Nilsson L., Geerlings P., and Messens J., "How thioredoxin dissociates its mixed disulfide.", PLoS Comput Biol, vol. 5, issue 8, pp. e1000461, 2009 Aug.
2008
Hegyi, H., and Tompa P., "Intrinsically disordered proteins display no preference for chaperone binding in vivo.", PLoS Comput Biol, vol. 4, issue 3, pp. e1000017, 2008 Mar.
2007
Goeminne, A., McNaughton M., Bal G., Surpateanu G., Van der Veken P., De Prol S., Versées W., Steyaert J., Apers S., Haemers A., et al., "1,2,3-Triazolylalkylribitol derivatives as nucleoside hydrolase inhibitors.", Bioorg Med Chem Lett, vol. 17, issue 9, pp. 2523-6, 2007 May 1.
Versées, W., Spaepen S., Vanderleyden J., and Steyaert J., "The crystal structure of phenylpyruvate decarboxylase from Azospirillum brasilense at 1.5 A resolution. Implications for its catalytic and regulatory mechanism.", FEBS J, vol. 274, issue 9, pp. 2363-75, 2007 May.
Fuxreiter, M., Tompa P., and Simon I., "Local structural disorder imparts plasticity on linear motifs.", Bioinformatics, vol. 23, issue 8, pp. 950-6, 2007 Apr 15.
Palló, A., Bencsura A., Héja L., Beke T., Perczel A., Kardos J., and Simon A., "Major human gamma-aminobutyrate transporter: in silico prediction of substrate efficacy.", Biochem Biophys Res Commun, vol. 364, issue 4, pp. 952-8, 2007 Dec 28.
Mészáros, B., Tompa P., Simon I., and Dosztányi Z., "Molecular principles of the interactions of disordered proteins.", J Mol Biol, vol. 372, issue 2, pp. 549-61, 2007 Sep 14.
Dessailly, B. H., Lensink M. F., and Wodak S. J., "Relating destabilizing regions to known functional sites in proteins.", BMC Bioinformatics, vol. 8, pp. 141, 2007.
Guharoy, M., and Chakrabarti P., "Secondary structure based analysis and classification of biological interfaces: identification of binding motifs in protein-protein interactions.", Bioinformatics, vol. 23, issue 15, pp. 1909-18, 2007 Aug 1.
2005
Fogh, R. H., Boucher W., Vranken W. F., Pajon A., Stevens T. J., Bhat T. N., Westbrook J., Ionides J. M. C., and Laue E. D., "A framework for scientific data modeling and automated software development.", Bioinformatics, vol. 21, issue 8, pp. 1678-84, 2005 Apr 15.
Mignon, P., Loverix S., Steyaert J., and Geerlings P., "Influence of the pi-pi interaction on the hydrogen bonding capacity of stacked DNA/RNA bases.", Nucleic Acids Res, vol. 33, issue 6, pp. 1779-89, 2005.
Dosztányi, Z., Csizmok V., Tompa P., and Simon I., "IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.", Bioinformatics, vol. 21, issue 16, pp. 3433-4, 2005 Aug 15.
Dosztányi, Z., Csizmok V., Tompa P., and Simon I., "The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.", J Mol Biol, vol. 347, issue 4, pp. 827-39, 2005 Apr 8.
Bernard, C., Houben K., Derix N. M., Marks D., van der Horst M. A., Hellingwerf K. J., Boelens R., Kaptein R., and van Nuland N. A. J., "The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein.", Structure, vol. 13, issue 7, pp. 953-62, 2005 Jul.
Loverix, S., Geerlings P., McNaughton M., Augustyns K., Vandemeulebroucke A., Steyaert J., and Versées W., "Substrate-assisted leaving group activation in enzyme-catalyzed N-glycosidic bond cleavage.", J Biol Chem, vol. 280, issue 15, pp. 14799-802, 2005 Apr 15.

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