Publications

Found 356 results
Filters: Keyword is Models, Molecular  [Clear All Filters]
2003
Lah, J., I. Marianovsky, G. Glaser, H. Engelberg-Kulka, J. Kinne, L. Wyns, and R. Loris, "Recognition of the intrinsically flexible addiction antidote MazE by a dromedary single domain antibody fragment. Structure, thermodynamics of binding, stability, and influence on interactions with DNA.", J Biol Chem, vol. 278, issue 16, pp. 14101-11, 2003 Apr 18.
Buts, L., R. Loris, E. De Genst, S. Oscarson, M. Lahmann, J. Messens, E. Brosens, L. Wyns, H. De Greve, and J. Bouckaert, "Solving the phase problem for carbohydrate-binding proteins using selenium derivatives of their ligands: a case study involving the bacterial F17-G adhesin.", Acta Crystallogr D Biol Crystallogr, vol. 59, issue Pt 6, pp. 1012-5, 2003 Jun.
Loris, R., D. Tielker, K-E. Jaeger, and L. Wyns, "Structural basis of carbohydrate recognition by the lectin LecB from Pseudomonas aeruginosa.", J Mol Biol, vol. 331, issue 4, pp. 861-70, 2003 Aug 22.
2002
Ochagavia, M. Elena, J. Richelle, and S. J. Wodak, "Advanced pairwise structure alignments of proteins and analysis of conformational changes.", Bioinformatics, vol. 18, issue 4, pp. 637-40, 2002 Apr.
Messens, J., J. C. Martins, K. Van Belle, E. Brosens, A. Desmyter, M. De Gieter, J-M. Wieruszeski, R. Willem, L. Wyns, and I. Zegers, "All intermediates of the arsenate reductase mechanism, including an intramolecular dynamic disulfide cascade.", Proc Natl Acad Sci U S A, vol. 99, issue 13, pp. 8506-11, 2002 Jun 25.
Ogata, K., and S. J. Wodak, "Conserved water molecules in MHC class-I molecules and their putative structural and functional roles.", Protein Eng, vol. 15, issue 8, pp. 697-705, 2002 Aug.
Vergauwen, B., F. Van Petegem, H. Remaut, F. Pauwels, and J. Van Beeumen, "Crystallization and preliminary X-ray crystallographic analysis of glutathione amide reductase from Chromatium gracile.", Acta Crystallogr D Biol Crystallogr, vol. 58, issue Pt 2, pp. 339-40, 2002 Feb.
Versées, W., K. Decanniere, E. Van Holsbeke, N. Devroede, and J. Steyaert, "Enzyme-substrate interactions in the purine-specific nucleoside hydrolase from Trypanosoma vivax.", J Biol Chem, vol. 277, issue 18, pp. 15938-46, 2002 May 03.
Dao-Thi, M-H., D. Charlier, R. Loris, D. Maes, J. Messens, L. Wyns, and J. Backmann, "Intricate interactions within the ccd plasmid addiction system.", J Biol Chem, vol. 277, issue 5, pp. 3733-42, 2002 Feb 1.
Tompa, P., "Intrinsically unstructured proteins.", Trends Biochem Sci, vol. 27, issue 10, pp. 527-33, 2002 Oct.
Lescar, J., R. Loris, E. Mitchell, C. Gautier, V. Chazalet, V. Cox, L. Wyns, S. Pérez, C. Breton, and A. Imberty, "Isolectins I-A and I-B of Griffonia (Bandeiraea) simplicifolia. Crystal structure of metal-free GS I-B(4) and molecular basis for metal binding and monosaccharide specificity.", J Biol Chem, vol. 277, issue 8, pp. 6608-14, 2002 Feb 22.
De Genst, E., D. Areskoug, K. Decanniere, S. Muyldermans, and K. Andersson, "Kinetic and affinity predictions of a protein-protein interaction using multivariate experimental design.", J Biol Chem, vol. 277, issue 33, pp. 29897-907, 2002 Aug 16.
Mignon, P., J. Steyaert, R. Loris, P. Geerlings, and S. Loverix, "A nucleophile activation dyad in ribonucleases. A combined X-ray crystallographic/ab initio quantum chemical study.", J Biol Chem, vol. 277, issue 39, pp. 36770-4, 2002 Sep 27.
Loris, R., "Principles of structures of animal and plant lectins.", Biochim Biophys Acta, vol. 1572, issue 2-3, pp. 198-208, 2002 Sep 19.
Janin, J., and S. J. Wodak, "Protein modules and protein-protein interaction. Introduction.", Adv Protein Chem, vol. 61, pp. 1-8, 2002.
Vranken, W. F., S. James, H. P. J. Bennett, and F. Ni, "Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.", Proteins, vol. 47, issue 1, pp. 14-24, 2002 Apr 1.
Wodak, S. J., and J. Janin, "Structural basis of macromolecular recognition.", Adv Protein Chem, vol. 61, pp. 9-73, 2002.
2001
Jaramillo, A., L. Wernisch, S. Hery, and S. J. Wodak, "Automatic procedures for protein design.", Comb Chem High Throughput Screen, vol. 4, issue 8, pp. 643-59, 2001 Dec.
Das, U., S. Chen, M. Fuxreiter, A. A. Vaguine, J. Richelle, H. M. Berman, and S. J. Wodak, "Checking nucleic acid crystal structures.", Acta Crystallogr D Biol Crystallogr, vol. 57, issue Pt 6, pp. 813-28, 2001 Jun.
Vranken, W. F., F. Fant, M. Budesinsky, and F. A. Borremans, "Conformational model for the consensus V3 loop of the envelope protein gp120 of HIV-1 in a 20% trifluoroethanol/water solution.", Eur J Biochem, vol. 268, issue 9, pp. 2620-8, 2001 May.
Govaerts, C., A. Lefort, S. Costagliola, S. J. Wodak, J. A. Ballesteros, J. Van Sande, L. Pardo, and G. Vassart, "A conserved Asn in transmembrane helix 7 is an on/off switch in the activation of the thyrotropin receptor.", J Biol Chem, vol. 276, issue 25, pp. 22991-9, 2001 Jun 22.
Decanniere, K., T. R. Transue, A. Desmyter, D. Maes, S. Muyldermans, and L. Wyns, "Degenerate interfaces in antigen-antibody complexes.", J Mol Biol, vol. 313, issue 3, pp. 473-8, 2001 Oct 26.
Nguyen, V. K., A. Desmyter, and S. Muyldermans, "Functional heavy-chain antibodies in Camelidae.", Adv Immunol, vol. 79, pp. 261-96, 2001.
De Vos, S., J. Backmann, M. Prévost, J. Steyaert, and R. Loris, "Hydrophobic core manipulations in ribonuclease T1.", Biochemistry, vol. 40, issue 34, pp. 10140-9, 2001 Aug 28.
Reader, J. S., N. A. J. van Nuland, G. S. Thompson, S. J. Ferguson, C. M. Dobson, and S. E. Radford, "A partially folded intermediate species of the beta-sheet protein apo-pseudoazurin is trapped during proline-limited folding.", Protein Sci, vol. 10, issue 6, pp. 1216-24, 2001 Jun.

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