Publications

Found 36 results
Filters: Author is Vranken, Wim F  [Clear All Filters]
2010
Fogh, R. H., W. Boucher, J. M. C. Ionides, W. F. Vranken, T. J. Stevens, and E. D. Laue, "MEMOPS: data modelling and automatic code generation.", J Integr Bioinform, vol. 7, issue 3, 2010.
Penkett, C. J., G. van Ginkel, S. Velankar, J. G Swaminathan, E. L. Ulrich, S. Mading, T. J. Stevens, R. H. Fogh, A. Gutmanas, G. J. Kleywegt, et al., "Straightforward and complete deposition of NMR data to the PDBe.", J Biomol NMR, vol. 48, issue 2, pp. 85-92, 2010 Oct.
Rieping, W., and W. F. Vranken, "Validation of archived chemical shifts through atomic coordinates.", Proteins, vol. 78, issue 11, pp. 2482-9, 2010 Aug 15.
2009
Rosato, A., A. Bagaria, D. Baker, B. Bardiaux, A. Cavalli, J. F. Doreleijers, A. Giachetti, P. Guerry, P. Güntert, T. Herrmann, et al., "CASD-NMR: critical assessment of automated structure determination by NMR.", Nat Methods, vol. 6, issue 9, pp. 625-6, 2009 Sep.
Doreleijers, J. F., W. F. Vranken, C. Schulte, J. Lin, J. R. Wedell, C. J. Penkett, G. W. Vuister, G. Vriend, J. L. Markley, and E. L. Ulrich, "The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries.", J Biomol NMR, vol. 45, issue 4, pp. 389-96, 2009 Dec.
Vranken, W. F., and W. Rieping, "Relationship between chemical shift value and accessible surface area for all amino acid atoms.", BMC Struct Biol, vol. 9, pp. 20, 2009.
2006
Fogh, R. H., W. F. Vranken, W. Boucher, T. J. Stevens, and E. D. Laue, "A nomenclature and data model to describe NMR experiments.", J Biomol NMR, vol. 36, issue 3, pp. 147-55, 2006 Nov.
2005
Vranken, W. F., W. Boucher, T. J. Stevens, R. H. Fogh, A. Pajon, M. Llinas, E. L. Ulrich, J. L. Markley, J. Ionides, and E. D. Laue, "The CCPN data model for NMR spectroscopy: development of a software pipeline.", Proteins, vol. 59, issue 4, pp. 687-96, 2005 Jun 1.
Fogh, R. H., W. Boucher, W. F. Vranken, A. Pajon, T. J. Stevens, T. N. Bhat, J. Westbrook, J. M. C. Ionides, and E. D. Laue, "A framework for scientific data modeling and automated software development.", Bioinformatics, vol. 21, issue 8, pp. 1678-84, 2005 Apr 15.
2002
Pajon, A., W. F. Vranken, M. Angeles Jimenez, M. Rico, and S. J. Wodak, "Pescador: the PEptides in Solution ConformAtion Database: Online Resource.", J Biomol NMR, vol. 23, issue 2, pp. 85-102, 2002 Jun.
Vranken, W. F., S. James, H. P. J. Bennett, and F. Ni, "Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.", Proteins, vol. 47, issue 1, pp. 14-24, 2002 Apr 1.

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