Found 347 results
Filters: Keyword is Models, Molecular  [Clear All Filters]
Bethuyne, J., S. De Gieter, O. Zwaenepoel, A. Garcia-Pino, K. Durinck, A. Verhelle, G. Hassanzadeh-Ghassabeh, F. Speleman, R. Loris, and J. Gettemans, "A nanobody modulates the p53 transcriptional program without perturbing its functional architecture.", Nucleic Acids Res, vol. 42, issue 20, pp. 12928-38, 2014 Nov 10.
Denoncin, K., D. Vertommen, I. S. Arts, C. V. Goemans, S. Rahuel-Clermont, J. Messens, and J-F. Collet, "A new role for Escherichia coli DsbC protein in protection against oxidative stress.", J Biol Chem, vol. 289, issue 18, pp. 12356-64, 2014 May 02.
Polyansky, A. A., A. O. Chugunov, P. E. Volynsky, N. A. Krylov, D. E. Nolde, and R. G. Efremov, "PREDDIMER: a web server for prediction of transmembrane helical dimers.", Bioinformatics, vol. 30, issue 6, pp. 889-90, 2014 Mar 15.
Abskharon, R. N. N., G. Giachin, A. Wohlkonig, S. H. Soror, E. Pardon, G. Legname, and J. Steyaert, "Probing the N-terminal β-sheet conversion in the crystal structure of the human prion protein bound to a nanobody.", J Am Chem Soc, vol. 136, issue 3, pp. 937-44, 2014 Jan 22.
Lensink, M. F., and S. J. Wodak, "Score_set: a CAPRI benchmark for scoring protein complexes.", Proteins, vol. 82, issue 11, pp. 3163-9, 2014 Nov.
Sterckx, Y. G. J., A. Volkov, W. F. Vranken, J. Kragelj, M. Ringkjøbi Jensen, L. Buts, A. Garcia-Pino, T. Jové, L. Van Melderen, M. Blackledge, et al., "Small-angle X-ray scattering- and nuclear magnetic resonance-derived conformational ensemble of the highly flexible antitoxin PaaA2.", Structure, vol. 22, issue 6, pp. 854-65, 2014 Jun 10.
Zorzini, V., L. Buts, M. Sleutel, A. Garcia-Pino, A. Talavera, S. Haesaerts, H. De Greve, A. Cheung, N. A. J. van Nuland, and R. Loris, "Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics.", Nucleic Acids Res, vol. 42, issue 10, pp. 6709-25, 2014 Jun.
Goyal, P., P. V. Krasteva, N. Van Gerven, F. Gubellini, I. Van den Broeck, A. Troupiotis-Tsaïlaki, W. Jonckheere, G. Péhau-Arnaudet, J. S. Pinkner, M. R. Chapman, et al., "Structural and mechanistic insights into the bacterial amyloid secretion channel CsgG.", Nature, vol. 516, issue 7530, pp. 250-3, 2014 Dec 11.
Vanwetswinkel, S., A. Volkov, Y. G. J. Sterckx, A. Garcia-Pino, L. Buts, W. F. Vranken, J. Bouckaert, R. Roy, L. Wyns, and N. A. J. van Nuland, "Study of the structural and dynamic effects in the FimH adhesin upon α-d-heptyl mannose binding.", J Med Chem, vol. 57, issue 4, pp. 1416-27, 2014 Feb 27.
Macossay-Castillo, M., S. Kosol, P. Tompa, and R. Pancsa, "Synonymous constraint elements show a tendency to encode intrinsically disordered protein segments.", PLoS Comput Biol, vol. 10, issue 5, pp. e1003607, 2014 May.
Hubin, E., N. A. J. van Nuland, K. Broersen, and K. Pauwels, "Transient dynamics of Aβ contribute to toxicity in Alzheimer's disease.", Cell Mol Life Sci, vol. 71, issue 18, pp. 3507-21, 2014 Sep.
Kruse, A. C., A. M. Ring, A. Manglik, J. Hu, K. Hu, K. Eitel, H. Hübner, E. Pardon, C. Valant, P. M. Sexton, et al., "Activation and allosteric modulation of a muscarinic acetylcholine receptor.", Nature, vol. 504, issue 7478, pp. 101-6, 2013 Dec 05.
Sohier, J. S., C. Laurent, A. Chevigné, E. Pardon, V. Srinivasan, U. Wernery, P. Lassaux, J. Steyaert, and M. Galleni, "Allosteric inhibition of VIM metallo-β-lactamases by a camelid nanobody.", Biochem J, vol. 450, issue 3, pp. 477-86, 2013 Mar 15.
Lo, A. W. H., K. Moonens, and H. Remaut, "Chemical attenuation of pilus function and assembly in Gram-negative bacteria.", Curr Opin Microbiol, vol. 16, issue 1, pp. 85-92, 2013 Feb.
Dubovskii, P. V., A. G. Konshina, and R. G. Efremov, "Cobra cardiotoxins: membrane interactions and pharmacological potential.", Curr Med Chem, vol. 21, issue 3, pp. 270-87, 2013.
Roldan, J. L. Ortega, S. Casares, M. Ringkjøbi Jensen, N. Cárdenes, J. Bravo, M. Blackledge, A. I. Azuaga, and N. A. J. van Nuland, "Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.", PLoS One, vol. 8, issue 9, pp. e73018, 2013.
Drobnak, I., N. De Jonge, S. Haesaerts, G. Vesnaver, R. Loris, and J. Lah, "Energetic basis of uncoupling folding from binding for an intrinsically disordered protein.", J Am Chem Soc, vol. 135, issue 4, pp. 1288-94, 2013 Jan 30.
Volkov, A., A. Wohlkonig, S. H. Soror, and N. A. J. van Nuland, "Expression, purification, characterization, and solution nuclear magnetic resonance study of highly deuterated yeast cytochrome C peroxidase with enhanced solubility.", Biochemistry, vol. 52, issue 13, pp. 2165-75, 2013 Apr 2.
Castro-Roa, D., A. Garcia-Pino, S. De Gieter, N. A. J. van Nuland, R. Loris, and N. Zenkin, "The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu.", Nat Chem Biol, vol. 9, issue 12, pp. 811-7, 2013 Dec.
van der Schot, G., Z. Zhang, R. Vernon, Y. Shen, W. F. Vranken, D. Baker, A. M. J. J. Bonvin, and O. F. Lange, "Improving 3D structure prediction from chemical shift data.", J Biomol NMR, vol. 57, issue 1, pp. 27-35, 2013 Sep.
Mackinnon, S. S., A. Malevanets, and S. J. Wodak, "Intertwined associations in structures of homooligomeric proteins.", Structure, vol. 21, issue 4, pp. 638-49, 2013 Apr 2.
Kovacs, D., B. Szabo, R. Pancsa, and P. Tompa, "Intrinsically disordered proteins undergo and assist folding transitions in the proteome.", Arch Biochem Biophys, vol. 531, issue 1-2, pp. 80-9, 2013 Mar.
Sazanov, L. A., R. Baradaran, R. G. Efremov, J. M. Berrisford, and G. Minhas, "A long road towards the structure of respiratory complex I, a giant molecular proton pump.", Biochem Soc Trans, vol. 41, issue 5, pp. 1265-71, 2013 Oct.
Banner, D. W., B. Gsell, J. Benz, J. Bertschinger, D. Burger, S. Brack, S. Cuppuleri, M. Debulpaep, A. Gast, D. Grabulovski, et al., "Mapping the conformational space accessible to BACE2 using surface mutants and cocrystals with Fab fragments, Fynomers and Xaperones.", Acta Crystallogr D Biol Crystallogr, vol. 69, issue Pt 6, pp. 1124-37, 2013 Jun.
Guerry, P., L. Salmon, L. Mollica, J. L. Ortega Roldan, P. Markwick, N. A. J. van Nuland, A. J McCammon, and M. Blackledge, "Mapping the population of protein conformational energy sub-states from NMR dipolar couplings.", Angew Chem Int Ed Engl, vol. 52, issue 11, pp. 3181-5, 2013 Mar 11.