Publications
Found 20 results
Filters: Keyword is Binding Sites and Author is Shoshana J Wodak [Clear All Filters]
"Activators of cylindrical proteases as antimicrobials: identification and development of small molecule activators of ClpP protease.",
Chem Biol, vol. 18, issue 9, pp. 1167-78, 2011 Sep 23.
"Community-wide assessment of protein-interface modeling suggests improvements to design methodology.",
J Mol Biol, vol. 414, issue 2, pp. 289-302, 2011 Nov 25.
"Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.",
PLoS One, vol. 5, issue 11, pp. e14122, 2010.
"LigASite--a database of biologically relevant binding sites in proteins with known apo-structures.",
Nucleic Acids Res, vol. 36, issue Database issue, pp. D667-73, 2008 Jan.
"CYGD: the Comprehensive Yeast Genome Database.",
Nucleic Acids Res, vol. 33, issue Database issue, pp. D364-8, 2005 Jan 1.
"Shift in nucleotide conformational equilibrium contributes to increased rate of catalysis of GpAp versus GpA in barnase.",
Proteins, vol. 56, issue 2, pp. 261-76, 2004 Aug 1.
"Assessment of blind predictions of protein-protein interactions: current status of docking methods.",
Proteins, vol. 52, issue 1, pp. 51-67, 2003 Jul 1.
"Structural basis of macromolecular recognition.",
Adv Protein Chem, vol. 61, pp. 9-73, 2002.
"Solution structure of the main alpha-amylase inhibitor from amaranth seeds.",
Eur J Biochem, vol. 268, issue 8, pp. 2379-89, 2001 Apr.
"Standard atomic volumes in double-stranded DNA and packing in protein--DNA interfaces.",
Nucleic Acids Res, vol. 29, issue 16, pp. 3362-76, 2001 Aug 15.
"The TXP motif in the second transmembrane helix of CCR5. A structural determinant of chemokine-induced activation.",
J Biol Chem, vol. 276, issue 16, pp. 13217-25, 2001 Apr 20.
"Pathways of ligand clearance in acetylcholinesterase by multiple copy sampling.",
J Mol Biol, vol. 298, issue 4, pp. 705-26, 2000 May 12.
"Structural features of protein-nucleic acid recognition sites.",
Biochemistry, vol. 38, issue 7, pp. 1999-2017, 1999 Feb 16.
"Analysis of zinc binding sites in protein crystal structures.",
Protein Sci, vol. 7, issue 8, pp. 1700-16, 1998 Aug.
"Modeling of the three-dimensional structure of proteins with the typical leucine-rich repeats.",
Structure, vol. 3, issue 9, pp. 867-77, 1995 Sep 15.
"Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 2. Site-directed mutagenesis of the xylose binding site.",
Biochemistry, vol. 31, issue 24, pp. 5459-66, 1992 Jun 23.
"Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 1. Crystallography and site-directed mutagenesis of metal binding sites.",
Biochemistry, vol. 31, issue 24, pp. 5449-58, 1992 Jun 23.
"Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 3. Changing metal specificity and the pH profile by site-directed mutagenesis.",
Biochemistry, vol. 31, issue 24, pp. 5467-71, 1992 Jun 23.
"Modification of human hemoglobin by glutathione. III. Perturbations of hemoglobin conformation analyzed by computer modeling.",
J Biol Chem, vol. 261, issue 31, pp. 14717-24, 1986 Nov 5.
"Hemoglobin interaction in sickle cell fibers. I: Theoretical approaches to the molecular contacts.",
Proc Natl Acad Sci U S A, vol. 72, issue 4, pp. 1330-4, 1975 Apr.