Publications

Found 313 results
Filters: Keyword is Protein Conformation  [Clear All Filters]
2012
Tompa, P., "Intrinsically disordered proteins: a 10-year recap.", Trends Biochem Sci, vol. 37, issue 12, pp. 509-16, 2012 Dec.
Kalmar, L., V. Acs, D. Silhavy, and P. Tompa, "Long-range interactions in nonsense-mediated mRNA decay are mediated by intrinsically disordered protein regions.", J Mol Biol, vol. 424, issue 3-4, pp. 125-31, 2012 Dec 7.
Martinez-Rodriguez, S., A. Garcia-Pino, F. Javier Las Heras-Vázquez, J. María Clemente-Jiménez, F. Rodríguez-Vico, J. M. García-Ruiz, R. Loris, and J. Antonio Gavira, "Mutational and structural analysis of L-N-carbamoylase reveals new insights into a peptidase M20/M25/M40 family member.", J Bacteriol, vol. 194, issue 21, pp. 5759-68, 2012 Nov.
Van Laer, K., L. Buts, N. Foloppe, D. Vertommen, K. Van Belle, K. Wahni, G. Roos, L. Nilsson, L. M. Mateos, M. Rawat, et al., "Mycoredoxin-1 is one of the missing links in the oxidative stress defence mechanism of Mycobacteria.", Mol Microbiol, vol. 86, issue 4, pp. 787-804, 2012 Nov.
Doreleijers, J. F., W. F. Vranken, C. Schulte, J. L. Markley, E. L. Ulrich, G. Vriend, and G. W. Vuister, "NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDB.", Nucleic Acids Res, vol. 40, issue Database issue, pp. D519-24, 2012 Jan.
Velankar, S., Y. Alhroub, C. Best, S. Caboche, M. J. Conroy, J. M. Dana, M. A. Fernande Montecelo, G. van Ginkel, A. Golovin, S. P. Gore, et al., "PDBe: Protein Data Bank in Europe.", Nucleic Acids Res, vol. 40, issue Database issue, pp. D445-52, 2012 Jan.
Sahakyan, A. B., A. Cavalli, W. F. Vranken, and M. Vendruscolo, "Protein structure validation using side-chain chemical shifts.", J Phys Chem B, vol. 116, issue 16, pp. 4754-9, 2012 Apr 26.
Volkov, A., S. Vanwetswinkel, K. Van de Water, and N. A. J. van Nuland, "Redox-dependent conformational changes in eukaryotic cytochromes revealed by paramagnetic NMR spectroscopy.", J Biomol NMR, vol. 52, issue 3, pp. 245-56, 2012 Mar.
Kalmar, L., D. Homola, G. Varga, and P. Tompa, "Structural disorder in proteins brings order to crystal growth in biomineralization.", Bone, vol. 51, issue 3, pp. 528-34, 2012 Sep.
Moonens, K., J. Bouckaert, A. Coddens, T. Tran, S. Panjikar, M. De Kerpel, E. Cox, H. Remaut, and H. De Greve, "Structural insight in histo-blood group binding by the F18 fimbrial adhesin FedF.", Mol Microbiol, vol. 86, issue 1, pp. 82-95, 2012 Oct.
Kaplan-Türköz, B., L. F. Jiménez-Soto, C. Dian, C. Ertl, H. Remaut, A. Louche, T. Tosi, R. Haas, and L. Terradot, "Structural insights into Helicobacter pylori oncoprotein CagA interaction with β1 integrin.", Proc Natl Acad Sci U S A, vol. 109, issue 36, pp. 14640-5, 2012 Sep 04.
Tompa, P., "On the supertertiary structure of proteins.", Nat Chem Biol, vol. 8, issue 7, pp. 597-600, 2012 Jul.
Tsytlonok, M., and L. S. Itzhaki, "Using FlAsH to probe conformational changes in a large HEAT repeat protein.", Chembiochem, vol. 13, issue 8, pp. 1199-205, 2012 May 29.
2011
Bernard, A., W. F. Vranken, B. Bardiaux, M. Nilges, and T. E. Malliavin, "Bayesian estimation of NMR restraint potential and weight: a validation on a representative set of protein structures.", Proteins, vol. 79, issue 5, pp. 1525-37, 2011 May.
Oyen, D., V. Srinivasan, J. Steyaert, and J. N. Barlow, "Constraining enzyme conformational change by an antibody leads to hyperbolic inhibition.", J Mol Biol, vol. 407, issue 1, pp. 138-48, 2011 Mar 18.
Villadangos, A. F., K. Van Belle, K. Wahni, V. Tamu Dufe, S. Freitas, H. Nur, S. De Galan, J. A. Gil, J-F. Collet, L. M. Mateos, et al., "Corynebacterium glutamicum survives arsenic stress with arsenate reductases coupled to two distinct redox mechanisms.", Mol Microbiol, vol. 82, issue 4, pp. 998-1014, 2011 Nov.
Turinsky, A. L., B. Turner, R. C. Borja, J. A. Gleeson, M. Heath, S. Pu, T. Switzer, D. Dong, Y. Gong, T. On, et al., "DAnCER: disease-annotated chromatin epigenetics resource.", Nucleic Acids Res, vol. 39, issue Database issue, pp. D889-94, 2011 Jan.
Malevanets, A., and S. J. Wodak, "Multiple replica repulsion technique for efficient conformational sampling of biological systems.", Biophys J, vol. 101, issue 4, pp. 951-60, 2011 Aug 17.
Steyaert, J., and B. K. Kobilka, "Nanobody stabilization of G protein-coupled receptor conformational states.", Curr Opin Struct Biol, vol. 21, issue 4, pp. 567-72, 2011 Aug.
Velankar, S., Y. Alhroub, A. Alili, C. Best, H. C. Boutselakis, S. Caboche, M. J. Conroy, J. M. Dana, G. van Ginkel, A. Golovin, et al., "PDBe: Protein Data Bank in Europe.", Nucleic Acids Res, vol. 39, issue Database issue, pp. D402-10, 2011 Jan.
Szasz, C. S., A. Alexa, K. Toth, M. Rakacs, J. Langowski, and P. Tompa, "Protein disorder prevails under crowded conditions.", Biochemistry, vol. 50, issue 26, pp. 5834-44, 2011 Jul 5.
Thys, B., D. Saerens, L. Schotte, G. De Bleeser, S. Muyldermans, G. Hassanzadeh-Ghassabeh, and B. Rombaut, "A simple quantitative affinity capturing assay of poliovirus antigens and subviral particles by single-domain antibodies using magnetic beads.", J Virol Methods, vol. 173, issue 2, pp. 300-5, 2011 May.
Roldan, J. L. Ortega, M. Blackledge, N. A. J. van Nuland, and A. I. Azuaga, "Solution structure, dynamics and thermodynamics of the three SH3 domains of CD2AP.", J Biomol NMR, vol. 50, issue 2, pp. 103-17, 2011 Jun.
Westfield, G. H., S. G. F. Rasmussen, M. Su, S. Dutta, B. T. Devree, K. Young Chung, D. Calinski, G. Velez-Ruiz, A. N. Oleskie, E. Pardon, et al., "Structural flexibility of the G alpha s alpha-helical domain in the beta2-adrenoceptor Gs complex.", Proc Natl Acad Sci U S A, vol. 108, issue 38, pp. 16086-91, 2011 Sep 20.
Rasmussen, S. G. F., H-J. Choi, J. Jose Fung, E. Pardon, P. Casarosa, P. Seok Chae, B. T. Devree, D. M. Rosenbaum, F. Sun Thian, T. Sun Kobilka, et al., "Structure of a nanobody-stabilized active state of the β(2) adrenoceptor.", Nature, vol. 469, issue 7329, pp. 175-80, 2011 Jan 13.

Pages