Publications

Found 12 results
Filters: Keyword is Models, Molecular and Author is Vranken, Wim F  [Clear All Filters]
2014
Sterckx, Y. G. J., A. Volkov, W. F. Vranken, J. Kragelj, M. Ringkjøbi Jensen, L. Buts, A. Garcia-Pino, T. Jové, L. Van Melderen, M. Blackledge, et al., "Small-angle X-ray scattering- and nuclear magnetic resonance-derived conformational ensemble of the highly flexible antitoxin PaaA2.", Structure, vol. 22, issue 6, pp. 854-65, 2014 Jun 10.
Vanwetswinkel, S., A. Volkov, Y. G. J. Sterckx, A. Garcia-Pino, L. Buts, W. F. Vranken, J. Bouckaert, R. Roy, L. Wyns, and N. A. J. van Nuland, "Study of the structural and dynamic effects in the FimH adhesin upon α-d-heptyl mannose binding.", J Med Chem, vol. 57, issue 4, pp. 1416-27, 2014 Feb 27.
2013
van der Schot, G., Z. Zhang, R. Vernon, Y. Shen, W. F. Vranken, D. Baker, A. M. J. J. Bonvin, and O. F. Lange, "Improving 3D structure prediction from chemical shift data.", J Biomol NMR, vol. 57, issue 1, pp. 27-35, 2013 Sep.
Montelione, G. T., M. Nilges, A. Bax, P. Güntert, T. Herrmann, J. S. Richardson, C. D. Schwieters, W. F. Vranken, G. W. Vuister, D. S. Wishart, et al., "Recommendations of the wwPDB NMR Validation Task Force.", Structure, vol. 21, issue 9, pp. 1563-70, 2013 Sep 3.
2012
Rosato, A., J. M. Aramini, C. Arrowsmith, A. Bagaria, D. Baker, A. Cavalli, J. F. Doreleijers, A. Eletsky, A. Giachetti, P. Guerry, et al., "Blind testing of routine, fully automated determination of protein structures from NMR data.", Structure, vol. 20, issue 2, pp. 227-36, 2012 Feb 8.
Doreleijers, J. F., A. W. Sousa da Silva, E. Krieger, S. B. Nabuurs, C. A. E. M. Spronk, T. J. Stevens, W. F. Vranken, G. Vriend, and G. W. Vuister, "CING: an integrated residue-based structure validation program suite.", J Biomol NMR, vol. 54, issue 3, pp. 267-83, 2012 Nov.
Sahakyan, A. B., A. Cavalli, W. F. Vranken, and M. Vendruscolo, "Protein structure validation using side-chain chemical shifts.", J Phys Chem B, vol. 116, issue 16, pp. 4754-9, 2012 Apr 26.
2011
von der Lieth, C-W., A. Ardá Freire, D. Blank, M. P. Campbell, A. Ceroni, D. R. Damerell, A. Dell, R. A. Dwek, B. Ernst, R. Fogh, et al., "EUROCarbDB: An open-access platform for glycoinformatics.", Glycobiology, vol. 21, issue 4, pp. 493-502, 2011 Apr.
Sahakyan, A. B., W. F. Vranken, A. Cavalli, and M. Vendruscolo, "Structure-based prediction of methyl chemical shifts in proteins.", J Biomol NMR, vol. 50, issue 4, pp. 331-46, 2011 Aug.
Sahakyan, A. B., W. F. Vranken, A. Cavalli, and M. Vendruscolo, "Using side-chain aromatic proton chemical shifts for a quantitative analysis of protein structures.", Angew Chem Int Ed Engl, vol. 50, issue 41, pp. 9620-3, 2011 Oct 4.
2009
Rosato, A., A. Bagaria, D. Baker, B. Bardiaux, A. Cavalli, J. F. Doreleijers, A. Giachetti, P. Guerry, P. Güntert, T. Herrmann, et al., "CASD-NMR: critical assessment of automated structure determination by NMR.", Nat Methods, vol. 6, issue 9, pp. 625-6, 2009 Sep.
2002
Vranken, W. F., S. James, H. P. J. Bennett, and F. Ni, "Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.", Proteins, vol. 47, issue 1, pp. 14-24, 2002 Apr 1.