Publications

Found 347 results
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2010
Lensink, M. F., and S. J. Wodak, "Blind predictions of protein interfaces by docking calculations in CAPRI.", Proteins, vol. 78, issue 15, pp. 3085-95, 2010 Nov 15.
Roos, G., P. Geerlings, and J. Messens, "The conserved active site tryptophan of thioredoxin has no effect on its redox properties.", Protein Sci, vol. 19, issue 1, pp. 190-4, 2010 Jan.
Guharoy, M., and P. Chakrabarti, "Conserved residue clusters at protein-protein interfaces and their use in binding site identification.", BMC Bioinformatics, vol. 11, pp. 286, 2010.
Chorell, E., J. S. Pinkner, G. Phan, S. Edvinsson, F. Buelens, H. Remaut, G. Waksman, S. J. Hultgren, and F. Almqvist, "Design and synthesis of C-2 substituted thiazolo and dihydrothiazolo ring-fused 2-pyridones: pilicides with increased antivirulence activity.", J Med Chem, vol. 53, issue 15, pp. 5690-5, 2010 Aug 12.
Lensink, M. F., and S. J. Wodak, "Docking and scoring protein interactions: CAPRI 2009.", Proteins, vol. 78, issue 15, pp. 3073-84, 2010 Nov 15.
Kosol, S., and K. Zangger, "Dynamics and orientation of a cationic antimicrobial peptide in two membrane-mimetic systems.", J Struct Biol, vol. 170, issue 1, pp. 172-9, 2010 Apr.
Remans, K., K. Pauwels, P. van Ulsen, L. Buts, P. Cornelis, J. Tommassen, S. N. Savvides, K. Decanniere, and P. Van Gelder, "Hydrophobic surface patches on LolA of Pseudomonas aeruginosa are essential for lipoprotein binding.", J Mol Biol, vol. 401, issue 5, pp. 921-30, 2010 Sep 3.
Van den Abbeele, A., S. De Clercq, A. De Ganck, V. De Corte, B. Van Loo, S. Hamdy Soror, V. Srinivasan, J. Steyaert, J. Vandekerckhove, and J. Gettemans, "A llama-derived gelsolin single-domain antibody blocks gelsolin-G-actin interaction.", Cell Mol Life Sci, vol. 67, issue 9, pp. 1519-35, 2010 May.
Volkov, A., M. Ubbink, and N. A. J. van Nuland, "Mapping the encounter state of a transient protein complex by PRE NMR spectroscopy.", J Biomol NMR, vol. 48, issue 4, pp. 225-36, 2010 Dec.
Kirchhofer, A., J. Helma, K. Schmidthals, C. Frauer, S. Cui, A. Karcher, M. Pellis, S. Muyldermans, C. S. Casas-Delucchi, C. M Cardoso, et al., "Modulation of protein properties in living cells using nanobodies.", Nat Struct Mol Biol, vol. 17, issue 1, pp. 133-8, 2010 Jan.
Guharoy, M., J. Janin, and C. H. Robert, "Side-chain rotamer transitions at protein-protein interfaces.", Proteins, vol. 78, issue 15, pp. 3219-25, 2010 Nov 15.
De Genst, E., T. Guilliams, J. Wellens, E. M. O'Day, C. A. Waudby, S. Meehan, M. Dumoulin, S-T. D. Hsu, N. Cremades, K. H. G. Verschueren, et al., "Structure and properties of a complex of α-synuclein and a single-domain camelid antibody.", J Mol Biol, vol. 402, issue 2, pp. 326-43, 2010 Sep 17.
Collet, J-F., and J. Messens, "Structure, function, and mechanism of thioredoxin proteins.", Antioxid Redox Signal, vol. 13, issue 8, pp. 1205-16, 2010 Oct.
2009
Ortega-Roldan, J. Luis, M. Ringkjøbing Jensen, B. Brutscher, A. I. Azuaga, M. Blackledge, and N. A. J. van Nuland, "Accurate characterization of weak macromolecular interactions by titration of NMR residual dipolar couplings: application to the CD2AP SH3-C:ubiquitin complex.", Nucleic Acids Res, vol. 37, issue 9, pp. e70, 2009 May.
Conrath, K., A. S. Pereira, C. E. Martins, C. G. Timóteo, P. Tavares, S. Spinelli, J. Kinne, C. Flaudrops, C. Cambillau, S. Muyldermans, et al., "Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase.", Protein Sci, vol. 18, issue 3, pp. 619-28, 2009 Mar.
Rosato, A., A. Bagaria, D. Baker, B. Bardiaux, A. Cavalli, J. F. Doreleijers, A. Giachetti, P. Guerry, P. Güntert, T. Herrmann, et al., "CASD-NMR: critical assessment of automated structure determination by NMR.", Nat Methods, vol. 6, issue 9, pp. 625-6, 2009 Sep.
Korotkov, K. V., E. Pardon, J. Steyaert, and W. G. J. Hol, "Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody.", Structure, vol. 17, issue 2, pp. 255-65, 2009 Feb 13.
Versées, W., A. Goeminne, M. Berg, A. Vandemeulebroucke, A. Haemers, K. Augustyns, and J. Steyaert, "Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors.", Biochim Biophys Acta, vol. 1794, issue 6, pp. 953-60, 2009 Jun.
Biswas, S., M. Guharoy, and P. Chakrabarti, "Dissection, residue conservation, and structural classification of protein-DNA interfaces.", Proteins, vol. 74, issue 3, pp. 643-54, 2009 Feb 15.
Simic, M., N. De Jonge, R. Loris, G. Vesnaver, and J. Lah, "Driving forces of gyrase recognition by the addiction toxin CcdB.", J Biol Chem, vol. 284, issue 30, pp. 20002-10, 2009 Jul 24.
Guharoy, M., and P. Chakrabarti, "Empirical estimation of the energetic contribution of individual interface residues in structures of protein-protein complexes.", J Comput Aided Mol Des, vol. 23, issue 9, pp. 645-54, 2009 Sep.
Drobnak, I., A. Korencic, R. Loris, I. Marianovsky, G. Glaser, A. Jamnik, G. Vesnaver, and J. Lah, "Energetics of MazG unfolding in correlation with its structural features.", J Mol Biol, vol. 392, issue 1, pp. 63-74, 2009 Sep 11.
Van Molle, I., K. Moonens, L. Buts, A. Garcia-Pino, S. Panjikar, L. Wyns, H. De Greve, and J. Bouckaert, "The F4 fimbrial chaperone FaeE is stable as a monomer that does not require self-capping of its pilin-interactive surfaces.", Acta Crystallogr D Biol Crystallogr, vol. 65, issue Pt 5, pp. 411-20, 2009 May.
Meyer, S., A. Wittinghofer, and W. Versées, "G-domain dimerization orchestrates the tRNA wobble modification reaction in the MnmE/GidA complex.", J Mol Biol, vol. 392, issue 4, pp. 910-22, 2009 Oct 2.
Vincke, C., R. Loris, D. Saerens, S. Martinez-Rodriguez, S. Muyldermans, and K. Conrath, "General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.", J Biol Chem, vol. 284, issue 5, pp. 3273-84, 2009 Jan 30.

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