Publications

Found 10 results
Filters: Keyword is Models, Molecular and Author is Guharoy, Mainak  [Clear All Filters]
2016
Guharoy, M., P. Bhowmick, M. Sallam, and P. Tompa, "Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system.", Nat Commun, vol. 7, pp. 10239, 2016 Jan 06.
2015
Varadi, M., M. Guharoy, F. Zsolyomi, and P. Tompa, "DisCons: a novel tool to quantify and classify evolutionary conservation of intrinsic protein disorder.", BMC Bioinformatics, vol. 16, pp. 153, 2015 May 13.
Varadi, M., F. Zsolyomi, M. Guharoy, and P. Tompa, "Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins.", PLoS One, vol. 10, issue 10, pp. e0139731, 2015.
2011
Fleishman, S. J., T. A. Whitehead, E-M. Strauch, J. E. Corn, S. Qin, H-X. Zhou, J. C. Mitchell, O. N. A. Demerdash, M. Takeda-Shitaka, G. Terashi, et al., "Community-wide assessment of protein-interface modeling suggests improvements to design methodology.", J Mol Biol, vol. 414, issue 2, pp. 289-302, 2011 Nov 25.
Guharoy, M., A. Pal, M. Dasgupta, and P. Chakrabarti, "PRICE (PRotein Interface Conservation and Energetics): a server for the analysis of protein-protein interfaces.", J Struct Funct Genomics, vol. 12, issue 1, pp. 33-41, 2011 Mar.
2010
Guharoy, M., and P. Chakrabarti, "Conserved residue clusters at protein-protein interfaces and their use in binding site identification.", BMC Bioinformatics, vol. 11, pp. 286, 2010.
Guharoy, M., J. Janin, and C. H. Robert, "Side-chain rotamer transitions at protein-protein interfaces.", Proteins, vol. 78, issue 15, pp. 3219-25, 2010 Nov 15.
2009
Biswas, S., M. Guharoy, and P. Chakrabarti, "Dissection, residue conservation, and structural classification of protein-DNA interfaces.", Proteins, vol. 74, issue 3, pp. 643-54, 2009 Feb 15.
Guharoy, M., and P. Chakrabarti, "Empirical estimation of the energetic contribution of individual interface residues in structures of protein-protein complexes.", J Comput Aided Mol Des, vol. 23, issue 9, pp. 645-54, 2009 Sep.
2007
Guharoy, M., and P. Chakrabarti, "Secondary structure based analysis and classification of biological interfaces: identification of binding motifs in protein-protein interactions.", Bioinformatics, vol. 23, issue 15, pp. 1909-18, 2007 Aug 1.