Structural snapshots of OxyR reveal the peroxidatic mechanism of HO sensing.

TitleStructural snapshots of OxyR reveal the peroxidatic mechanism of HO sensing.
Publication TypeJournal Article
Year of Publication2018
AuthorsPedre, B., D. Young, D. Charlier, A. Mourenza, L. Astolfi Rosado, L. Marcos-Pascual, K. Wahni, E. Martens, A. G. de la Rubia, V. V. Belousov, L. M. Mateos, and J. Messens
JournalProc Natl Acad Sci U S A
Volume115
Issue50
PaginationE11623-E11632
Date Published2018 12 11
ISSN1091-6490
KeywordsAmino Acid Substitution, Bacterial Proteins, Binding Sites, Catalase, Corynebacterium glutamicum, Crystallography, X-Ray, Genes, Bacterial, Hydrogen Peroxide, Kinetics, Mutagenesis, Site-Directed, Oxidation-Reduction, Protein Structure, Quaternary, Transcription Factors, Transcription, Genetic
Abstract

Hydrogen peroxide (HO) is a strong oxidant capable of oxidizing cysteinyl thiolates, yet only a few cysteine-containing proteins have exceptional reactivity toward HO One such example is the prokaryotic transcription factor OxyR, which controls the antioxidant response in bacteria, and which specifically and rapidly reduces HO In this study, we present crystallographic evidence for the HO-sensing mechanism and HO-dependent structural transition of OxyR by capturing the reduced and HO-bound structures of a serine mutant of the peroxidatic cysteine, and the full-length crystal structure of disulfide-bonded oxidized OxyR. In the HO-bound structure, we pinpoint the key residues for the peroxidatic reduction of HO, and relate this to mutational assays showing that the conserved active-site residues T107 and R278 are critical for effective HO reduction. Furthermore, we propose an allosteric mode of structural change, whereby a localized conformational change arising from HO-induced intramolecular disulfide formation drives a structural shift at the dimerization interface of OxyR, leading to overall changes in quaternary structure and an altered DNA-binding topology and affinity at the catalase promoter region. This study provides molecular insights into the overall OxyR transcription mechanism regulated by HO.

DOI10.1073/pnas.1807954115
Alternate JournalProc. Natl. Acad. Sci. U.S.A.
PubMed ID30463959
PubMed Central IDPMC6294878
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